Research workbench
Hypermodified nucleosides in the anticodon of trnalys stabilize a canonical U-turn structure
Analyse Hypermodified nucleosides in the anticodon of trnalys stabilize a canonical… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1FL8
- Type
- RNA
- Length
- 16 nucleotides
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Anticodon domain of TRNA(LYS)
- Ligands
- U8U
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Anticodon domain of TRNA(LYS) | rna | 16 | — | — |
Ligands and binding sites
- U8U · 5-methylaminomethyl-2-thiouridine-5'-monophosphate · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 2 covalent, 2 modified (covalent ligand, nucleotide modification).
Compared structures
- 1FL8 · Hypermodified nucleosides in the anticodon of trnalys stabilize a canonical U-turn… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1FL8 · PDBe 1FL8
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