Research workbench
Ethanolamine utilization microcompartment shell subunit, euts
Analyse Ethanolamine utilization microcompartment shell subunit, euts in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3I96
- Type
- protein
- Length
- 329 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ethanolamine utilization protein euts
- UniProt
- P63746
- Ligands
- CL, SO4
- Pockets
- 1 · best druggability 0.48
Structure
x-ray diffraction · 3 distinct chains · 36% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ethanolamine utilization protein euts | protein | 109 | 35% helix, 35% strand | P63746 |
| B | Ethanolamine utilization protein euts | protein | 111 | 36% helix, 32% strand | P63746 |
| C | Ethanolamine utilization protein euts | protein | 109 | 37% helix, 34% strand | P63746 |
Ligands and binding sites
- CL · Chloride ion · ion · chains A
- SO4 · Sulfate ion · ion · chains A, B, C
- GOL · Glycerol · additive · 8 copies · chains A, B, C
- NHE · 2-[N-cyclohexylamino]ethane sulfonic acid · additive · chains C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 200 | 0.48 | 0.75 | 28 | empty |
Interfaces
3 interfaces between chains.
- A–C · 1394 Ų buried · 16 hydrogen bonds · protein-protein
- A–B · 1248 Ų buried · 17 hydrogen bonds · protein-protein
- B–C · 84 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 3I96 · Ethanolamine Utilization Microcompartment Shell Subunit, EutS · the same entry in another collection · chain A against A, TM-score 1.00
- P63746 · AlphaFold monomer V2.0 prediction for ethanolamine utilization protein euts (P63746) · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P63746
- Elsewhere: RCSB PDB 3I96 · PDBe 3I96 · UniProt P63746
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.