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NUP170(AA979-1502), S.CEREVISIAE

Analyse NUP170(AA979-1502), S.CEREVISIAE in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3I5P
Type: protein
Length: 449 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Nucleoporin NUP170
UniProt: P38181
Pockets: 3 · best druggability 0.50

Structure

x-ray diffraction · 1 distinct chain · 70% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Nucleoporin NUP170	protein	449	70% helix, 0% strand	P38181

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	150	0.50	0.78	31	empty
2	159	0.44	0.75	23	empty
3	64	0.35	0.77	12	empty

Compared structures

3I5P · Nup170(aa979-1502), S.cerevisiae · the same entry in another collection · chain A against A, TM-score 1.00
P38181 · AlphaFold monomer V2.0 prediction for nucleoporin NUP170 (P38181) · a predicted model of the same protein · chain A against A, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P38181
Elsewhere: RCSB PDB 3I5P · PDBe 3I5P · UniProt P38181

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