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Conserved folding in retroviral proteases. crystal structure of a synthetic HIV-1 protease
Analyse Conserved folding in retroviral proteases. crystal structure of a synthetic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3HVP
- Type
- protein
- Length
- 99 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Unliganded HIV-1 protease
- UniProt
- P03369
- Pockets
- 1 · best druggability 0.49
Structure
x-ray diffraction · 1 distinct chain · 7% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Unliganded HIV-1 protease | protein | 99 | 7% helix, 43% strand | P03369 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 150 | 0.49 | 0.78 | 19 | empty |
Modifications
Observed in the structure: 2 modified (nonstandard).
Compared structures
- 3HVP · Conserved folding in retroviral proteases. crystal structure of a synthetic HIV-1 protease · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03369
- Elsewhere: RCSB PDB 3HVP · PDBe 3HVP · UniProt P03369
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