Research workbench
Crystal structure of fimx ggdef domain from pseudomonas aeruginosa
Analyse Crystal structure of fimx ggdef domain from pseudomonas aeruginosa in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3HVA
- Type
- protein
- Length
- 324 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein fimx
- EC
- 2.7.7.65
- UniProt
- Q9HUK6
- Pockets
- 2 · best druggability 0.70
Structure
x-ray diffraction · 1 distinct chain · 50% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Protein fimx (EC 2.7.7.65) | protein | 162 | 50% helix, 24% strand | Q9HUK6 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 276 | 0.70 | 0.85 | 40 | empty |
| 2 | 61 | 0.30 | 0.75 | 17 | empty |
Interfaces
1 interface between chains.
- A–B · 721 Ų buried · 10 hydrogen bonds · protein-protein
Compared structures
- 3HVA · Crystal structure of FimX GGDEF domain from Pseudomonas aeruginosa · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HUK6
- Elsewhere: RCSB PDB 3HVA · PDBe 3HVA · UniProt Q9HUK6
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