Research workbench
The structure of intact ap-tbpb (N and C lobes)
Analyse The structure of intact ap-tbpb (N and C lobes) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3HOL
- Type
- protein
- Length
- 505 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Tbpb
- UniProt
- Q44124
- Pockets
- 5 · best druggability 0.68
Structure
x-ray diffraction · 1 distinct chain · 3% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tbpb | protein | 505 | 3% helix, 50% strand | Q44124 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 593 | 0.68 | 0.77 | 64 | empty |
| 2 | 136 | 0.46 | 0.77 | 30 | empty |
| 3 | 124 | 0.44 | 0.77 | 20 | empty |
| 4 | 99 | 0.36 | 0.74 | 22 | empty |
| 5 | 82 | 0.30 | 0.73 | 23 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 3HOL · The Structure of Intact Ap-TbpB (N and C lobes) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q44124
- Elsewhere: RCSB PDB 3HOL · PDBe 3HOL · UniProt Q44124
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