Research workbench
Minor editosome-associated tutase 1
Analyse Minor editosome-associated tutase 1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3HJ4
- Type
- protein
- Length
- 764 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Minor editosome-associated tutase
- UniProt
- Q4GZ86
- Pockets
- 8 · best druggability 0.77
Structure
x-ray diffraction · 2 distinct chains · 57% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Minor editosome-associated tutase | protein | 381 | 57% helix, 9% strand | Q4GZ86 |
| B | Minor editosome-associated tutase | protein | 383 | 57% helix, 9% strand | Q4GZ86 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 890 | 0.77 | 0.80 | 76 | empty |
| 2 | 882 | 0.76 | 0.79 | 76 | empty |
| 3 | 466 | 0.66 | 0.78 | 45 | empty |
| 4 | 98 | 0.41 | 0.77 | 17 | empty |
| 5 | 98 | 0.38 | 0.76 | 18 | empty |
Interfaces
1 interface between chains.
- A–B · 648 Ų buried · 7 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 24 modified (engineered).
Compared structures
- 3HJ4 · Minor Editosome-Associated TUTase 1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4GZ86
- Elsewhere: RCSB PDB 3HJ4 · PDBe 3HJ4 · UniProt Q4GZ86
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.