Research workbench
Structure of phenazine antibiotic biosynthesis protein
Analyse Structure of phenazine antibiotic biosynthesis protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3HGV
- Type
- protein
- Length
- 691 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ehpf
- UniProt
- Q8GPH0
- Pockets
- 11 · best druggability 0.76
Structure
x-ray diffraction · 2 distinct chains · 38% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ehpf | protein | 346 | 38% helix, 24% strand | Q8GPH0 |
| B | Ehpf | protein | 345 | 38% helix, 23% strand | Q8GPH0 |
Pockets
11 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 859 | 0.76 | 0.79 | 53 | empty |
| 2 | 862 | 0.76 | 0.79 | 60 | empty |
| 3 | 578 | 0.74 | 0.81 | 56 | empty |
| 4 | 61 | 0.51 | 0.87 | 19 | empty |
| 5 | 147 | 0.43 | 0.75 | 21 | empty |
Interfaces
1 interface between chains.
- A–B · 1878 Ų buried · 31 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 14 modified (engineered).
Compared structures
- 3HGV · Structure of Phenazine Antibiotic Biosynthesis Protein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8GPH0
- Elsewhere: RCSB PDB 3HGV · PDBe 3HGV · UniProt Q8GPH0
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