Research workbench
Crystal structure of rabbit acidic fibroblast growth factor
Analyse Crystal structure of rabbit acidic fibroblast growth factor in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3HAL
- Type
- protein
- Length
- 262 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fibroblast growth factor 1 isoform 1
- UniProt
- B7NZB1
- Ligands
- SO4, CL
- Pockets
- 2 · best druggability 0.38
Structure
x-ray diffraction · 1 distinct chain · 11% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Fibroblast growth factor 1 isoform 1 | protein | 131 | 11% helix, 40% strand | B7NZB1 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 131 | 0.38 | 0.73 | 25 | empty |
| 2 | 89 | 0.34 | 0.74 | 19 | SO4, CL |
Interfaces
1 interface between chains.
- A–B · 283 Ų buried · 2 hydrogen bonds · protein-protein
Compared structures
- 3HAL · Crystal structure of Rabbit acidic fibroblast growth factor · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B7NZB1
- Elsewhere: RCSB PDB 3HAL · PDBe 3HAL · UniProt B7NZB1
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