Research workbench
Structure of the C-terminal domain of a putative HIV-1 GP41 fusion intermediate
Analyse Structure of the C-terminal domain of a putative HIV-1 GP41 fusion intermediate in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3H00
- Type
- protein
- Length
- 152 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Envelope glycoprotein GP160
- UniProt
- Q70626
Structure
x-ray diffraction · 3 distinct chains · 93% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | Envelope glycoprotein GP160 | protein | 39 | 92% helix, 0% strand | Q70626 |
| B | Envelope glycoprotein GP160 | protein | 38 | 95% helix, 0% strand | Q70626 |
| D | Envelope glycoprotein GP160 | protein | 36 | 92% helix, 0% strand | Q70626 |
Interfaces
2 interfaces between chains.
- A–C · 881 Ų buried · 12 hydrogen bonds · protein-protein
- B–D · 836 Ų buried · 12 hydrogen bonds · protein-protein
Compared structures
- 3H00 · Structure of the C-terminal Domain of a Putative HIV-1 gp41 Fusion Intermediate · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q70626
- Elsewhere: RCSB PDB 3H00 · PDBe 3H00 · UniProt Q70626
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