Research workbench
Crystal structure of the protein CV2077 from chromobacterium violaceum. northeast structural genomics consortium target CVR62
Analyse Crystal structure of the protein CV2077 from chromobacterium violaceum.… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3GVZ
- Type
- protein
- Length
- 512 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein CV2077
- UniProt
- Q7NWB3
- Pockets
- 2 · best druggability 0.61
Structure
x-ray diffraction · 1 distinct chain · 20% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Uncharacterized protein CV2077 | protein | 256 | 20% helix, 35% strand | Q7NWB3 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 260 | 0.61 | 0.80 | 36 | empty |
| 2 | 283 | 0.59 | 0.79 | 36 | empty |
Interfaces
1 interface between chains.
- A–B · 231 Ų buried · 3 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 3GVZ · Crystal structure of the protein CV2077 from Chromobacterium violaceum. Northeast… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7NWB3
- Elsewhere: RCSB PDB 3GVZ · PDBe 3GVZ · UniProt Q7NWB3
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