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Crystal structure of xync from bacillus subtilis 168

Analyse Crystal structure of xync from bacillus subtilis 168 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3GTN
Type
protein
Length
789 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Glucuronoxylanase xync
EC
3.2.1.136
UniProt
Q45070
Pockets
3 · best druggability 0.34

Structure

x-ray diffraction · 2 distinct chains · 25% helix, 32% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AGlucuronoxylanase xync (EC 3.2.1.136)protein39526% helix, 32% strandQ45070
BGlucuronoxylanase xync (EC 3.2.1.136)protein39425% helix, 33% strandQ45070

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1630.340.7717empty
2570.340.7818empty
3530.270.7312empty

Compared structures

  • 3GTN · Crystal Structure of XynC from Bacillus subtilis 168 · the same entry in another collection · chain A against A, TM-score 1.00
  • Q45070 · AlphaFold monomer V2.0 prediction for glucuronoxylanase xync (Q45070) · a predicted model of the same protein · chain B against A, TM-score 0.98

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