Research workbench
Crystal structure of the hspa from xanthomonas axonopodis
Analyse Crystal structure of the hspa from xanthomonas axonopodis in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3GT6
- Type
- protein
- Length
- 200 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Low molecular weight heat shock protein
- UniProt
- Q8PNC2
- Pockets
- 1 · best druggability 0.64
Structure
x-ray diffraction · 2 distinct chains · 11% helix, 51% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Low molecular weight heat shock protein | protein | 100 | 9% helix, 51% strand | Q8PNC2 |
| B | Low molecular weight heat shock protein | protein | 100 | 12% helix, 50% strand | Q8PNC2 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 119 | 0.64 | 0.88 | 18 | empty |
Interfaces
1 interface between chains.
- A–B · 1621 Ų buried · 54 hydrogen bonds · protein-protein
Compared structures
- 3GT6 · Crystal Structure of the hspA from Xanthomonas axonopodis · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8PNC2
- Elsewhere: RCSB PDB 3GT6 · PDBe 3GT6 · UniProt Q8PNC2
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