Structure of oye from geobacillus kaustophilus, orthorhombic crystal form

Structure

x-ray diffraction · 1 distinct chain · 37% helix, 16% strand (DSSP).

Ligands and binding sites

• FMN · Flavin mononucleotide · ligand · 2 copies · chains A, B
• SO4 · Sulfate ion · ion · chains A, B
• BTB · 2-[bis-(2-hydroxy-ethyl)-amino]-2-hydroxymethyl-propane-1,3-diol · additive · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Interfaces

1 interface between chains.

• A–B · 533 Ų buried · 7 hydrogen bonds · protein-protein

Compared structures

• 3GR8 · Structure of OYE from Geobacillus kaustophilus, orthorhombic crystal form · the same entry in another collection · chain A against A, TM-score 1.00
• Q5KXG9 · AlphaFold monomer V2.0 prediction for NADPH dehydrogenase (Q5KXG9) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q5KXG9
• Elsewhere: RCSB PDB 3GR8 · PDBe 3GR8 · UniProt Q5KXG9