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Crystal structure of the bacteriophage PHI29 gene product 12 C- terminal fragment in complex with ATP

Analyse Crystal structure of the bacteriophage PHI29 gene product 12 C- terminal… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3GQK
Type
protein
Length
163 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Preneck appendage protein
UniProt
B3VMP8
Ligands
ATP, MG

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 46% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
APreneck appendage proteinprotein1630% helix, 46% strandB3VMP8

Ligands and binding sites

  • ATP · Adenosine-5'-triphosphate · ligand · chains A
  • MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 3GQK · Crystal Structure of the Bacteriophage phi29 gene product 12 C-terminal fragment in… · the same entry in another collection · chain A against A, TM-score 1.00

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