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Structure of uncharacterized protein (LMOF2365_1472) from listeria monocytogenes serotype 4B

Analyse Structure of uncharacterized protein (LMOF2365_1472) from listeria… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3GNL
Type: protein
Length: 464 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Uncharacterized protein, DUF633, LMOF2365_1472
UniProt: Q71ZL7
Pockets: 2 · best druggability 0.69

Structure

x-ray diffraction · 2 distinct chains · 49% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized protein, DUF633, LMOF2365_1472	protein	234	49% helix, 23% strand	Q71ZL7
B	Uncharacterized protein, DUF633, LMOF2365_1472	protein	230	50% helix, 23% strand	Q71ZL7

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	457	0.69	0.80	60	empty
2	92	0.52	0.84	19	empty

Interfaces

1 interface between chains.

A–B · 999 Å² buried · 12 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 4 modified (engineered).

Compared structures

3GNL · Structure of uncharacterized protein (LMOf2365_1472) from Listeria monocytogenes serotype… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q71ZL7
Elsewhere: RCSB PDB 3GNL · PDBe 3GNL · UniProt Q71ZL7

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