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Crystal structure of beta-lactamse inhibitory protein-like protein (blp), selenomethionine derivative

Analyse Crystal structure of beta-lactamse inhibitory protein-like protein (blp)… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3GMY
Type: protein
Length: 308 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Blp
UniProt: P97062
Pockets: 5 · best druggability 0.78

Structure

x-ray diffraction · 1 distinct chain · 21% helix, 32% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Blp	protein	154	21% helix, 32% strand	P97062

Pockets

5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	109	0.78	0.97	32	empty
2	226	0.56	0.78	23	empty
3	206	0.54	0.78	21	empty
4	105	0.39	0.76	19	empty
5	100	0.37	0.75	20	empty

Interfaces

1 interface between chains.

A–B · 1257 Å² buried · 8 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 8 modified, 4 disulfide (engineered, disulfide).

Compared structures

3GMY · Crystal Structure of Beta-Lactamse Inhibitory Protein-Like Protein (BLP)… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P97062
Elsewhere: RCSB PDB 3GMY · PDBe 3GMY · UniProt P97062

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