Research workbench
Crystal structure of beta-lactamse inhibitory protein-I (blip-I) in apo form
Analyse Crystal structure of beta-lactamse inhibitory protein-I (blip-I) in apo form in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3GMV
- Type
- protein
- Length
- 156 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Beta-lactamase inhibitory protein blip-I
- UniProt
- Q9KJ90
- Ligands
- TAM
- Pockets
- 2 · best druggability 0.52
Structure
x-ray diffraction · 1 distinct chain · 22% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| X | Beta-lactamase inhibitory protein blip-I | protein | 156 | 22% helix, 33% strand | Q9KJ90 |
Ligands and binding sites
- TAM · Tris(hydroxyethyl)aminomethane · ligand · chains X
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 99 | 0.52 | 0.83 | 21 | empty |
| 2 | 57 | 0.29 | 0.75 | 20 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 3GMV · Crystal Structure of Beta-Lactamse Inhibitory Protein-I (BLIP-I) in Apo Form · the same entry in another collection · chain X against X, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KJ90
- Elsewhere: RCSB PDB 3GMV · PDBe 3GMV · UniProt Q9KJ90
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