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Crystal structure from the mobile metagenome of halifax harbour sewage outfall: integron cassette protein HFX_CASS4

Analyse Crystal structure from the mobile metagenome of halifax harbour sewage outfall… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3GHJ
Type: protein
Length: 116 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative integron gene cassette protein
UniProt: B0BGV9
Pockets: 1 · best druggability 0.47

Structure

x-ray diffraction · 1 distinct chain · 23% helix, 43% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative integron gene cassette protein	protein	116	23% helix, 43% strand	B0BGV9

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	152	0.47	0.76	26	empty

Modifications

Observed in the structure: 2 modified (engineered).

Compared structures

3GHJ · Crystal structure from the mobile metagenome of Halifax Harbour Sewage Outfall: Integron… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B0BGV9
Elsewhere: RCSB PDB 3GHJ · PDBe 3GHJ · UniProt B0BGV9

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