Research workbench
Crystal structure of a tandem pas domain fragment of drosophila period
Analyse Crystal structure of a tandem pas domain fragment of drosophila period in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3GEC
- Type
- protein
- Length
- 257 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Period circadian protein
- UniProt
- P07663
- Pockets
- 2 · best druggability 0.51
Structure
x-ray diffraction · 1 distinct chain · 20% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Period circadian protein | protein | 257 | 20% helix, 25% strand | P07663 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 68 | 0.51 | 0.85 | 19 | empty |
| 2 | 110 | 0.37 | 0.74 | 27 | empty |
Compared structures
- 3GEC · Crystal structure of a tandem PAS domain fragment of Drosophila PERIOD · the same entry in another collection · chain A against A, TM-score 1.00
- P07663 · AlphaFold monomer V2.0 prediction for period circadian protein (P07663) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P07663
- Elsewhere: RCSB PDB 3GEC · PDBe 3GEC · UniProt P07663
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