Research workbench
Crystal studies of D(CACGCG).D(CGCGTG) grown in presence of calcium chloride
Analyse Crystal studies of D(CACGCG).D(CGCGTG) grown in presence of calcium chloride in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3GCY
- Type
- DNA
- Length
- 12 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-D(*CP*AP*CP*GP*CP*G)-3'; 5'-D(*CP*GP*CP*GP*TP*G)-3'
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 5'-D(*CP*AP*CP*GP*CP*G)-3' | dna | 6 | — | — |
| B | 5'-D(*CP*GP*CP*GP*TP*G)-3' | dna | 6 | — | — |
Interfaces
1 interface between chains.
- A–B · 323 Ų buried · 27 hydrogen bonds · nucleic-nucleic
Compared structures
- 3GCY · Crystal studies of d(CACGCG).d(CGCGTG) grown in presence of calcium chloride · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 3GCY · PDBe 3GCY
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