Research workbench
Crystal structure of mus musculus iodotyrosine deiodinase (iyd) bound to FMN
Analyse Crystal structure of mus musculus iodotyrosine deiodinase (iyd) bound to FMN in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3GB5
- Type
- protein
- Length
- 185 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Iodotyrosine dehalogenase 1
- UniProt
- Q9DCX8
- Ligands
- FMN, PO4
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Iodotyrosine dehalogenase 1 | protein | 185 | 42% helix, 15% strand | Q9DCX8 |
Ligands and binding sites
- FMN · Flavin mononucleotide · ligand · chains A
- PO4 · Phosphate ion · ion · chains A
- ACT · Acetate ion · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 3GB5 · Crystal structure of Mus musculus iodotyrosine deiodinase (IYD) bound to FMN · the same entry in another collection · chain A against A, TM-score 1.00
- Q9DCX8 · AlphaFold monomer V2.0 prediction for iodotyrosine deiodinase 1 (Q9DCX8) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9DCX8
- Elsewhere: RCSB PDB 3GB5 · PDBe 3GB5 · UniProt Q9DCX8
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