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Structure of a F112A variant pduo-type ATP:CORRINOID adenosyltransferase from lactobacillus reuteri complexed with cobalamin and ATP

Analyse Structure of a F112A variant pduo-type ATP:CORRINOID adenosyltransferase from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3GAI
Type
protein
Length
181 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Cobalamin adenosyltransferase pduo-like protein
EC
2.5.1.17
UniProt
Q50EJ2
Ligands
ATP, B12, K, MG, CL

Structure

x-ray diffraction · 1 distinct chain · 59% helix, 4% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ACobalamin adenosyltransferase pduo-like protein (EC 2.5.1.17)protein18159% helix, 4% strandQ50EJ2

Ligands and binding sites

  • ATP · Adenosine-5'-triphosphate · ligand · chains A
  • B12 · Cobalamin · ligand · chains A
  • K · Potassium ion · metal · 2 copies · chains A
  • MG · Magnesium ion · metal · chains A
  • CL · Chloride ion · ion · 2 copies · chains A
  • GOL · Glycerol · additive · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 3GAI · Structure of a F112A variant PduO-type ATP:corrinoid adenosyltransferase from… · the same entry in another collection · chain A against A, TM-score 1.00

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