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Crystal structure of the C-terminal domain of the rous sarcoma virus capsid protein: mutant D179N, low pH

Analyse Crystal structure of the C-terminal domain of the rous sarcoma virus capsid… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3G28
Type
protein
Length
77 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Gag polyprotein
EC
3.4.23.-
UniProt
P03322
Ligands
NO3

Structure

x-ray diffraction · 1 distinct chain · 64% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AGag polyprotein (EC 3.4.23.-)protein7764% helix, 0% strandP03322

Ligands and binding sites

  • NO3 · Nitrate ion · ion · 2 copies · chains A
  • GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 3G28 · Crystal structure of the C-terminal domain of the Rous Sarcoma Virus capsid protein… · the same entry in another collection · chain A against A, TM-score 1.00

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