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Crystal structure of the C-terminal domain of the rous sarcoma virus capsid protein: intermediate pH
Analyse Crystal structure of the C-terminal domain of the rous sarcoma virus capsid… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3G1I
- Type
- protein
- Length
- 151 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Gag polyprotein
- EC
- 3.4.23.-
- UniProt
- P03322
- Ligands
- SO4
Structure
x-ray diffraction · 2 distinct chains · 66% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Gag polyprotein (EC 3.4.23.-) | protein | 76 | 64% helix, 0% strand | P03322 |
| B | Gag polyprotein (EC 3.4.23.-) | protein | 75 | 67% helix, 0% strand | P03322 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 805 Ų buried · 10 hydrogen bonds · protein-protein
Compared structures
- 3G1I · Crystal structure of the C-terminal domain of the Rous Sarcoma Virus capsid protein… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03322
- Elsewhere: RCSB PDB 3G1I · PDBe 3G1I · UniProt P03322
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