Research workbench
NMR solution structure of a chimeric oligonucleotide hairpin R(GGAC) D(TTCG)2'F-A(GTCC)
Analyse NMR solution structure of a chimeric oligonucleotide hairpin R(GGAC)… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1FC8
- Type
- DNA
- Length
- 12 nucleotides
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-R(*GP*GP*AP*CP)D(*TP*TP*CP*GP*(GFL)P*(TAF)P*(CFL) P*(CFL))-3'
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 5'-R(*GP*GP*AP*CP)D(*TP*TP*CP*GP*(GFL)P*(TAF)P*(CFL) P*(CFL))-3' | dna | 12 | — | — |
Modifications
Observed in the structure: 4 modified (nucleotide modification).
Compared structures
- 1FC8 · NMR solution structure of a chimeric oligonucleotide hairpin R(GGAC)D(TTCG)2'F-A(GTCC) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1FC8 · PDBe 1FC8
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