Research workbench
Glycosylated SV2 and gangliosides as dual receptors for botulinum neurotoxin serotype F
Analyse Glycosylated SV2 and gangliosides as dual receptors for botulinum neurotoxin… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3FUQ
- Type
- protein
- Length
- 399 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- BONT/F (neurotoxin type F)
- UniProt
- Q57236
- Pockets
- 2 · best druggability 0.62
Structure
x-ray diffraction · 1 distinct chain · 5% helix, 49% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | BONT/F (neurotoxin type F) | protein | 399 | 5% helix, 49% strand | Q57236 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 271 | 0.62 | 0.80 | 32 | empty |
| 2 | 96 | 0.40 | 0.77 | 22 | empty |
Compared structures
- 3FUQ · Glycosylated SV2 and Gangliosides as Dual Receptors for Botulinum Neurotoxin Serotype F · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q57236
- Elsewhere: RCSB PDB 3FUQ · PDBe 3FUQ · UniProt Q57236
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