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Crystal structure of uncharacterized protein conserved in bacteria with a cystatin-like fold (YP_168589.1) from silicibacter pomeroyi dss-3 at 2.00 a resolution

Analyse Crystal structure of uncharacterized protein conserved in bacteria with a… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3FLJ
Type: protein
Length: 141 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Uncharacterized protein conserved in bacteria with a cystatin-like fold
UniProt: Q5LN19
Ligands: UNL
Pockets: 1 · best druggability 0.53

Structure

x-ray diffraction · 1 distinct chain · 38% helix, 38% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized protein conserved in bacteria with a cystatin-like fold	protein	141	38% helix, 38% strand	Q5LN19

Ligands and binding sites

UNL · Unknown ligand · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	100	0.53	0.83	20	empty

Modifications

Observed in the structure: 7 modified (engineered).

Compared structures

3FLJ · Crystal structure of uncharacterized protein conserved in bacteria with a cystatin-like… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5LN19
Elsewhere: RCSB PDB 3FLJ · PDBe 3FLJ · UniProt Q5LN19

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