Research workbench
Structure of TIP20P
Analyse Structure of TIP20P in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3FHN
- Type
- protein
- Length
- 2,692 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein transport protein TIP20
- UniProt
- P33891
- Pockets
- 20 · best druggability 0.83
Structure
x-ray diffraction · 1 distinct chain · 75% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | Protein transport protein TIP20 | protein | 673 | 75% helix, 1% strand | P33891 |
Pockets
20 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 860 | 0.83 | 0.85 | 78 | empty |
| 2 | 699 | 0.81 | 0.85 | 55 | empty |
| 3 | 443 | 0.72 | 0.82 | 44 | empty |
| 4 | 393 | 0.68 | 0.80 | 42 | empty |
| 5 | 326 | 0.60 | 0.78 | 28 | empty |
Interfaces
3 interfaces between chains.
- A–D · 1794 Ų buried · 11 hydrogen bonds · protein-protein
- A–B · 1680 Ų buried · 12 hydrogen bonds · protein-protein
- B–C · 1303 Ų buried · 22 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 40 modified (engineered).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P33891
- Elsewhere: RCSB PDB 3FHN · PDBe 3FHN · UniProt P33891
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