Research workbench
Crystal structure of the electron transfer flavoprotein subunit alpha related protein TA0212 from thermoplasma acidophilum
Analyse Crystal structure of the electron transfer flavoprotein subunit alpha related… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3FET
- Type
- protein
- Length
- 655 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Electron transfer flavoprotein subunit alpha related protein
- UniProt
- Q9HLL5
- Pockets
- 8 · best druggability 0.81
Structure
x-ray diffraction · 3 distinct chains · 26% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Electron transfer flavoprotein subunit alpha related protein | protein | 165 | 26% helix, 37% strand | Q9HLL5 |
| B, C | Electron transfer flavoprotein subunit alpha related protein | protein | 163 | 26% helix, 37% strand | Q9HLL5 |
| D | Electron transfer flavoprotein subunit alpha related protein | protein | 164 | 26% helix, 38% strand | Q9HLL5 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 770 | 0.81 | 0.84 | 94 | empty |
| 2 | 611 | 0.79 | 0.84 | 65 | empty |
| 3 | 227 | 0.77 | 0.91 | 32 | empty |
| 4 | 208 | 0.77 | 0.92 | 33 | empty |
| 5 | 120 | 0.48 | 0.79 | 15 | empty |
Interfaces
6 interfaces between chains.
- B–D · 1471 Ų buried · 22 hydrogen bonds · protein-protein
- A–C · 1366 Ų buried · 21 hydrogen bonds · protein-protein
- C–D · 410 Ų buried · 4 hydrogen bonds · protein-protein
- A–B · 404 Ų buried · 5 hydrogen bonds · protein-protein
- B–C · 344 Ų buried · 1 hydrogen bond · protein-protein
Modifications
Observed in the structure: 12 modified (engineered).
Compared structures
- 3FET · Crystal Structure of the Electron Transfer Flavoprotein Subunit Alpha related Protein… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HLL5
- Elsewhere: RCSB PDB 3FET · PDBe 3FET · UniProt Q9HLL5
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.