Research workbench
Crystal structure analysis of a full-length mcm homolog from methanopyrus kandleri
Analyse Crystal structure analysis of a full-length mcm homolog from methanopyrus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3F8T
- Type
- protein
- Length
- 459 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Predicted ATPase involved in replication control, CDC46/MCM family
- UniProt
- Q8TWB5
- Pockets
- 7 · best druggability 0.52
Structure
x-ray diffraction · 1 distinct chain · 46% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Predicted ATPase involved in replication control, CDC46/MCM family | protein | 459 | 46% helix, 21% strand | Q8TWB5 |
Pockets
7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 79 | 0.52 | 0.85 | 12 | empty |
| 2 | 178 | 0.43 | 0.74 | 20 | empty |
| 3 | 79 | 0.42 | 0.80 | 15 | empty |
| 4 | 61 | 0.37 | 0.79 | 14 | empty |
| 5 | 52 | 0.33 | 0.78 | 12 | empty |
Compared structures
- 3F8T · Crystal structure analysis of a full-length MCM homolog from Methanopyrus kandleri · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8TWB5
- Elsewhere: RCSB PDB 3F8T · PDBe 3F8T · UniProt Q8TWB5
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