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Crystal structure of a NTF2-like protein of unknown function (PP_4556) from pseudomonas putida KT2440 at 2.11 a resolution

Analyse Crystal structure of a NTF2-like protein of unknown function (PP_4556) from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3F7S
Type: protein
Length: 142 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Uncharacterized NTF2-like protein
UniProt: Q88EB0
Ligands: UNL, SO4
Pockets: 1 · best druggability 0.65

Structure

x-ray diffraction · 1 distinct chain · 28% helix, 42% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized NTF2-like protein	protein	142	28% helix, 42% strand	Q88EB0

Ligands and binding sites

UNL · Unknown ligand · ligand · chains A
SO4 · Sulfate ion · ion · chains A
GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	310	0.65	0.80	28	UNL

Modifications

Observed in the structure: 8 modified (engineered).

Compared structures

3F7S · Crystal structure of a NTF2-like protein of unknown function (PP_4556) from pseudomonas… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q88EB0
Elsewhere: RCSB PDB 3F7S · PDBe 3F7S · UniProt Q88EB0

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