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Soluble part of the junction adhesion molecule from mouse

Analyse Soluble part of the junction adhesion molecule from mouse in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1F97
Type: protein
Length: 207 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Junction adhesion molecule
UniProt: O88792
Ligands: MG

Structure

x-ray diffraction · 1 distinct chain · 4% helix, 52% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Junction adhesion molecule	protein	207	4% helix, 52% strand	O88792

Ligands and binding sites

MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

1F97 · Soluble part of the junction adhesion molecule from mouse · the same entry in another collection · chain A against A, TM-score 1.00
O88792 · AlphaFold monomer V2.0 prediction for junctional adhesion molecule a (O88792) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O88792
Elsewhere: RCSB PDB 1F97 · PDBe 1F97 · UniProt O88792

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