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Crystal structure of transcriptional regulator from cytophaga hutchinsonii atcc 33406

Analyse Crystal structure of transcriptional regulator from cytophaga hutchinsonii atcc… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3F0C
Type: protein
Length: 193 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Transcriptional regulator
UniProt: Q11WJ7
Ligands: SO4
Pockets: 2 · best druggability 0.69

Structure

x-ray diffraction · 1 distinct chain · 76% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Transcriptional regulator	protein	193	76% helix, 0% strand	Q11WJ7

Ligands and binding sites

SO4 · Sulfate ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	213	0.69	0.86	26	empty
2	62	0.34	0.77	14	empty

Modifications

Observed in the structure: 6 modified (engineered).

Compared structures

3F0C · Crystal structure of transcriptional regulator from Cytophaga hutchinsonii ATCC 33406 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q11WJ7
Elsewhere: RCSB PDB 3F0C · PDBe 3F0C · UniProt Q11WJ7

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