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Staphylococcal enterotoxin H determined to 2.4 a resolution

Analyse Staphylococcal enterotoxin H determined to 2.4 a resolution in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1F77
Type
protein
Length
424 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Enterotoxin H
UniProt
P0A0M0
Ligands
SO4
Pockets
1 · best druggability 0.38

Structure

x-ray diffraction · 2 distinct chains · 24% helix, 41% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AEnterotoxin Hprotein21224% helix, 41% strandP0A0M0
BEnterotoxin Hprotein21225% helix, 41% strandP0A0M0

Ligands and binding sites

  • SO4 · Sulfate ion · ion · 7 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1510.380.8216empty

Interfaces

1 interface between chains.

  • A–B · 657 Ų buried · 2 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

  • 1F77 · Staphylococcal enterotoxin H determined to 2.4 a resolution · the same entry in another collection · chain A against A, TM-score 1.00
  • P0A0M0 · AlphaFold monomer V2.0 prediction for enterotoxin type H (P0A0M0) · a predicted model of the same protein · chain B against A, TM-score 0.99

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