Research workbench
Structure of BT1043
Analyse Structure of BT1043 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3EHM
- Type
- protein
- Length
- 1,020 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Susd homolog
- UniProt
- Q8A8X4
- Pockets
- 8 · best druggability 0.50
Structure
x-ray diffraction · 1 distinct chain · 49% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Susd homolog | protein | 510 | 49% helix, 6% strand | Q8A8X4 |
Ligands and binding sites
- EDO · 1,2-ethanediol · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
8 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 103 | 0.50 | 0.81 | 23 | empty |
| 2 | 169 | 0.48 | 0.77 | 25 | empty |
| 3 | 107 | 0.47 | 0.80 | 15 | empty |
| 4 | 145 | 0.47 | 0.77 | 26 | empty |
| 5 | 99 | 0.46 | 0.80 | 27 | empty |
Modifications
Observed in the structure: 24 modified (engineered).
Compared structures
- 3EHM · Structure of BT1043 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8A8X4
- Elsewhere: RCSB PDB 3EHM · PDBe 3EHM · UniProt Q8A8X4
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.