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Crystal structure of ABC transporter, substrate binding protein aeropyrum pernix

Analyse Crystal structure of ABC transporter, substrate binding protein aeropyrum pernix in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3EAF
Type
protein
Length
384 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
ABC transporter, substrate binding protein
UniProt
Q9YCF4
Ligands
MG

Structure

x-ray diffraction · 1 distinct chain · 46% helix, 20% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AABC transporter, substrate binding proteinprotein38446% helix, 20% strandQ9YCF4

Ligands and binding sites

  • MG · Magnesium ion · metal · chains A
  • GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 5 modified (engineered).

Compared structures

  • 3EAF · Crystal structure of ABC transporter, substrate binding protein Aeropyrum pernix · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

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