Research workbench
Glycogen synthase kinase from leishmania major
Analyse Glycogen synthase kinase from leishmania major in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3E3P
- Type
- protein
- Length
- 674 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein kinase, putative glycogen synthase kinase
- EC
- 2.7.1.37
- UniProt
- Q4QE15
- Pockets
- 12 · best druggability 0.74
Structure
x-ray diffraction · 2 distinct chains · 41% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein kinase, putative glycogen synthase kinase (EC 2.7.1.37) | protein | 337 | 42% helix, 13% strand | Q4QE15 |
| B | Protein kinase, putative glycogen synthase kinase (EC 2.7.1.37) | protein | 337 | 41% helix, 14% strand | Q4QE15 |
Pockets
12 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 54 | 0.74 | 0.99 | 17 | empty |
| 2 | 119 | 0.50 | 0.80 | 20 | empty |
| 3 | 123 | 0.49 | 0.79 | 18 | empty |
| 4 | 217 | 0.46 | 0.74 | 30 | empty |
| 5 | 87 | 0.40 | 0.78 | 21 | empty |
Interfaces
1 interface between chains.
- A–B · 961 Ų buried · 20 hydrogen bonds · protein-protein
Compared structures
- 3E3P · Glycogen synthase kinase from Leishmania major · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4QE15
- Elsewhere: RCSB PDB 3E3P · PDBe 3E3P · UniProt Q4QE15
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