Research workbench
Iron reconstituted ferric binding protein from campylobacter jejuni
Analyse Iron reconstituted ferric binding protein from campylobacter jejuni in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3E13
- Type
- protein
- Length
- 317 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative iron-uptake ABC transport system, periplasmic iron-binding protein
- UniProt
- Q0PBW4
- Ligands
- FE
- Pockets
- 3 · best druggability 0.44
Structure
x-ray diffraction · 1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| X | Putative iron-uptake ABC transport system, periplasmic iron-binding protein | protein | 317 | 47% helix, 18% strand | Q0PBW4 |
Ligands and binding sites
- FE · Fe (III) ion · metal · chains X
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 135 | 0.44 | 0.76 | 29 | empty |
| 2 | 52 | 0.28 | 0.74 | 15 | empty |
| 3 | 61 | 0.26 | 0.72 | 15 | empty |
Compared structures
- 3E13 · Iron reconstituted ferric binding protein from Campylobacter jejuni · the same entry in another collection · chain X against X, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0PBW4
- Elsewhere: RCSB PDB 3E13 · PDBe 3E13 · UniProt Q0PBW4
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