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Crystal structure of bovin brain platelet activating factor acetylhydrolase covalently inhibited by sarin

Analyse Crystal structure of bovin brain platelet activating factor acetylhydrolase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3DT8
Type: protein
Length: 212 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Brain platelet-activating factor acetylhydrolase ib subunit alpha
EC: 3.1.1.47
UniProt: Q29460
Pockets: 1 · best druggability 0.29

Structure

x-ray diffraction · 1 distinct chain · 45% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Brain platelet-activating factor acetylhydrolase ib subunit alpha (EC 3.1.1.47)	protein	212	45% helix, 12% strand	Q29460

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	59	0.29	0.75	13	empty

Modifications

Observed in the structure: 1 modified (nonstandard).

Compared structures

3DT8 · Crystal Structure of Bovin Brain Platelet Activating Factor Acetylhydrolase Covalently… · the same entry in another collection · chain A against A, TM-score 1.00
Q29460 · AlphaFold monomer V2.0 prediction for platelet-activating factor acetylhydrolase ib… · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q29460
Elsewhere: RCSB PDB 3DT8 · PDBe 3DT8 · UniProt Q29460

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