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Crystal structure of UPF0317 protein ATU3911 from agrobacterium tumefaciens. northeast strcutural genomics target ATR186
Analyse Crystal structure of UPF0317 protein ATU3911 from agrobacterium tumefaciens.… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3DB9
- Type
- protein
- Length
- 235 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- UPF0317 protein ATU3911
- UniProt
- Q8U919
- Pockets
- 1 · best druggability 0.66
Structure
x-ray diffraction · 1 distinct chain · 19% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | UPF0317 protein ATU3911 | protein | 235 | 19% helix, 26% strand | Q8U919 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 690 | 0.66 | 0.75 | 61 | empty |
Compared structures
- 3DB9 · Crystal structure of UPF0317 protein Atu3911 from Agrobacterium tumefaciens. NorthEast… · the same entry in another collection · chain A against A, TM-score 1.00
- Q8U919 · AlphaFold monomer V2.0 prediction for putative hydro-lyase ATU3911 (Q8U919) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8U919
- Elsewhere: RCSB PDB 3DB9 · PDBe 3DB9 · UniProt Q8U919
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