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Crystal structure of 4-hydroxybutyrate CoA-transferase (abft-2) from porphyromonas gingivalis. northeast structural genomics consortium target PGR26
Analyse Crystal structure of 4-hydroxybutyrate CoA-transferase (abft-2) from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3D3U
- Type
- protein
- Length
- 387 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 4-hydroxybutyrate CoA-transferase
- UniProt
- Q7MTJ6
- Pockets
- 2 · best druggability 0.41
Structure
x-ray diffraction · 1 distinct chain · 31% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 4-hydroxybutyrate CoA-transferase | protein | 387 | 31% helix, 23% strand | Q7MTJ6 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 102 | 0.41 | 0.77 | 17 | empty |
| 2 | 51 | 0.38 | 0.80 | 10 | empty |
Compared structures
- 3D3U · Crystal structure of 4-hydroxybutyrate CoA-transferase (abfT-2) from Porphyromonas… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7MTJ6
- Elsewhere: RCSB PDB 3D3U · PDBe 3D3U · UniProt Q7MTJ6
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