Research workbench
Structure of an expansin like protein from bacillus subtilis at 1.9A resolution
Analyse Structure of an expansin like protein from bacillus subtilis at 1.9A resolution in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3D30
- Type
- protein
- Length
- 208 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Expansin like protein
- UniProt
- O34918
- Pockets
- 1 · best druggability 0.29
Structure
x-ray diffraction · 1 distinct chain · 8% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Expansin like protein | protein | 208 | 8% helix, 41% strand | O34918 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 52 | 0.29 | 0.75 | 14 | empty |
Compared structures
- 3D30 · Structure of an expansin like protein from Bacillus Subtilis at 1.9A resolution · the same entry in another collection · chain A against A, TM-score 1.00
- O34918 · AlphaFold monomer V2.0 prediction for expansin-yoaj (O34918) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O34918
- Elsewhere: RCSB PDB 3D30 · PDBe 3D30 · UniProt O34918
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