Research workbench
Tetragonal crystal structure of TAS3 C-terminal alpha motif
Analyse Tetragonal crystal structure of TAS3 C-terminal alpha motif in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3D1B
- Type
- protein
- Length
- 327 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA-induced transcriptional silencing complex protein TAS3
- UniProt
- O94687
- Pockets
- 1 · best druggability 0.73
Structure
x-ray diffraction · 2 distinct chains · 72% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA-induced transcriptional silencing complex protein TAS3 | protein | 111 | 72% helix, 2% strand | O94687 |
| B, C | RNA-induced transcriptional silencing complex protein TAS3 | protein | 108 | 72% helix, 2% strand | O94687 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 907 | 0.73 | 0.77 | 78 | empty |
Interfaces
3 interfaces between chains.
- A–B · 587 Ų buried · 9 hydrogen bonds · protein-protein
- B–C · 576 Ų buried · 6 hydrogen bonds · protein-protein
- A–C · 146 Ų buried · 1 hydrogen bond · protein-protein
Compared structures
- 3D1B · Tetragonal crystal structure of Tas3 C-terminal alpha motif · the same entry in another collection · chain B against B, TM-score 1.00
- O94687 · AlphaFold monomer V2.0 prediction for RNA-induced transcriptional silencing complex… · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O94687
- Elsewhere: RCSB PDB 3D1B · PDBe 3D1B · UniProt O94687
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.