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X-ray structures of the (guggucugaugaggcc) RNA duplex

Analyse X-ray structures of the (guggucugaugaggcc) RNA duplex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3CZW
Type
RNA
Length
14 nucleotides
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
RNA (5'-R(*G*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)- 3')
Ligands
SO4

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
XRNA (5'-R(*G*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)- 3')rna14——

Ligands and binding sites

  • SO4 · Sulfate ion · ion · chains X

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 3CZW · X-ray structures of the (GUGGUCUGAUGAGGCC) RNA duplex · the same entry in another collection · chain X against X, TM-score 1.00

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