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Crystal structure of a fic domain containing signaling protein (BT_2513) from bacteroides thetaiotaomicron vpi-5482 at 2.71 a resolution
Analyse Crystal structure of a fic domain containing signaling protein (BT_2513) from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3CUC
- Type
- protein
- Length
- 530 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein of unknown function with a fic domain
- UniProt
- Q8A4T4
- Pockets
- 5 · best druggability 0.75
Structure
x-ray diffraction · 2 distinct chains · 63% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein of unknown function with a fic domain | protein | 262 | 64% helix, 2% strand | Q8A4T4 |
| B | Protein of unknown function with a fic domain | protein | 268 | 63% helix, 2% strand | Q8A4T4 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 841 | 0.75 | 0.79 | 76 | empty |
| 2 | 203 | 0.55 | 0.79 | 28 | empty |
| 3 | 159 | 0.54 | 0.80 | 23 | empty |
| 4 | 86 | 0.40 | 0.78 | 14 | empty |
| 5 | 53 | 0.37 | 0.80 | 11 | empty |
Interfaces
1 interface between chains.
- A–B · 607 Ų buried · 5 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 10 modified (engineered).
Compared structures
- 3CUC · Crystal structure of a fic domain containing signaling protein (BT_2513) from bacteroides… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8A4T4
- Elsewhere: RCSB PDB 3CUC · PDBe 3CUC · UniProt Q8A4T4
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