Research workbench
The phage 434 CRO/OR1 complex at 2.5 ångströms resolution
Analyse The phage 434 CRO/OR1 complex at 2.5 ångströms resolution in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3CRO
- Type
- protein + DNA
- Length
- 170 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'- D(*AP*AP*GP*TP*AP*CP*AP*AP*AP*CP*TP*TP*TP*CP*TP*TP*G P*TP*AP*T)-3'); DNA (5'…
- UniProt
- P03036
- Pockets
- 1 · best druggability 0.27
Structure
x-ray diffraction · 4 distinct chains · 60% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA (5'- D(*AP*AP*GP*TP*AP*CP*AP*AP*AP*CP*TP*TP*TP*CP*TP*TP*G P*TP*AP*T)-3') | dna | 20 | — | — |
| B | DNA (5'- D(*TP*AP*TP*AP*CP*AP*AP*GP*AP*AP*AP*GP*TP*TP*TP*GP*T P*AP*CP*T)-3') | dna | 20 | — | — |
| L | Protein (434 cro) | protein | 66 | 58% helix, 0% strand | P03036 |
| R | Protein (434 cro) | protein | 64 | 63% helix, 0% strand | P03036 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 50 | 0.27 | 0.74 | 14 | empty |
Interfaces
6 interfaces between chains.
- A–B · 870 Ų buried · 89 hydrogen bonds · nucleic-nucleic
- B–R · 445 Ų buried · 9 hydrogen bonds · protein-nucleic
- L–R · 444 Ų buried · 8 hydrogen bonds · protein-protein
- A–L · 442 Ų buried · 7 hydrogen bonds · protein-nucleic
- B–L · 395 Ų buried · 6 hydrogen bonds · protein-nucleic
Compared structures
- 3CRO · The phage 434 CRO/OR1 complex at 2.5 ångströms resolution · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03036
- Elsewhere: RCSB PDB 3CRO · PDBe 3CRO · UniProt P03036
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