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3.88 ångström structure of cytoplasmic polyhedrosis virus by cryo-electron microscopy

Analyse 3.88 ångström structure of cytoplasmic polyhedrosis virus by cryo-electron… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
3CNF
Type
protein
Length
2,199 residues
Chains
3
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
VP1; VP3
UniProt
Q6TS43, Q9E957

Structure

electron microscopy · 3 distinct chains · 0% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AVP1protein9200% helix, 0% strandQ6TS43
BVP1protein9240% helix, 0% strandQ6TS43
TVP3protein3550% helix, 0% strandQ9E957

Interfaces

1 interface between chains.

  • A–B · 128 Ų buried · 0 hydrogen bonds · protein-protein

Compared structures

  • 3CNF · 3.88 Angstrom structure of cytoplasmic polyhedrosis virus by cryo-electron microscopy · the same entry in another collection · chain A against A, TM-score 1.00

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