Research workbench
Crystal structure of putative beta-lactamase (NP_815223.1) from enterococcus faecalis V583 at 1.50 a resolution
Analyse Crystal structure of putative beta-lactamase (NP_815223.1) from enterococcus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3CJM
- Type
- protein
- Length
- 255 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative beta-lactamase
- UniProt
- Q834X5
- Ligands
- NO3
- Pockets
- 1 · best druggability 0.39
Structure
x-ray diffraction · 1 distinct chain · 48% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative beta-lactamase | protein | 255 | 48% helix, 18% strand | Q834X5 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 102 | 0.39 | 0.76 | 23 | NO3, EDO |
Modifications
Observed in the structure: 6 modified (engineered).
Compared structures
- 3CJM · Crystal structure of putative beta-lactamase (NP_815223.1) from Enterococcus faecalis… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q834X5
- Elsewhere: RCSB PDB 3CJM · PDBe 3CJM · UniProt Q834X5
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