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Crystal structure of the uncharacterized human protein C8ORF32 with bound peptide
Analyse Crystal structure of the uncharacterized human protein C8ORF32 with bound… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3C9Q
- Type
- protein
- Length
- 198 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein C8ORF32; Synthetic peptide
- UniProt
- Q96HA8
- Ligands
- SO4, CO3
Structure
x-ray diffraction · 2 distinct chains · 27% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein C8ORF32 | protein | 195 | 28% helix, 23% strand | Q96HA8 |
| L | Synthetic peptide | protein | 3 | 0% helix, 0% strand | — |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 5 copies · chains A
- CO3 · Carbonate ion · ion · chains A
- EDO · 1,2-ethanediol · additive · 5 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–L · 235 Ų buried · 6 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 3C9Q · Crystal structure of the uncharacterized human protein C8orf32 with bound peptide · the same entry in another collection · chain L against L, TM-score 1.00
- Q96HA8 · AlphaFold monomer V2.0 prediction for protein N-terminal glutamine amidohydrolase (Q96HA8) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q96HA8
- Elsewhere: RCSB PDB 3C9Q · PDBe 3C9Q · UniProt Q96HA8
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